A playable implementation of Fully Convolutional Networks with Keras.

Overview

keras-fcn

Build Status codecov License: MIT

A re-implementation of Fully Convolutional Networks with Keras

Installation

Dependencies

  1. keras
  2. tensorflow

Install with pip

$ pip install git+https://github.com/JihongJu/keras-fcn.git

Build from source

$ git clone https://github.com/JihongJu/keras-fcn.git
$ cd keras-fcn
$ pip install --editable .

Usage

FCN with VGG16

from keras_fcn import FCN
fcn_vgg16 = FCN(input_shape=(500, 500, 3), classes=21,  
                weights='imagenet', trainable_encoder=True)
fcn_vgg16.compile(optimizer='rmsprop',
                  loss='categorical_crossentropy',
                  metrics=['accuracy'])
fcn_vgg16.fit(X_train, y_train, batch_size=1)

FCN with VGG19

from keras_fcn import FCN
fcn_vgg19 = FCN_VGG19(input_shape=(500, 500, 3), classes=21,  
                      weights='imagenet', trainable_encoder=True)
fcn_vgg19.compile(optimizer='rmsprop',
                  loss='categorical_crossentropy',
                  metrics=['accuracy'])
fcn_vgg19.fit(X_train, y_train, batch_size=1)

Custom FCN (VGG16 as an example)

from keras.layers import Input
from keras.models import Model
from keras_fcn.encoders import Encoder
from keras_fcn.decoders import VGGUpsampler
from keras_fcn.blocks import (vgg_conv, vgg_fc)
inputs = Input(shape=(224, 224, 3))
blocks = [vgg_conv(64, 2, 'block1'),
          vgg_conv(128, 2, 'block2'),
          vgg_conv(256, 3, 'block3'),
          vgg_conv(512, 3, 'block4'),
          vgg_conv(512, 3, 'block5'),
          vgg_fc(4096)]
encoder = Encoder(inputs, blocks, weights='imagenet',
                  trainable=True)
feat_pyramid = encoder.outputs   # A feature pyramid with 5 scales
feat_pyramid = feat_pyramid[:3]  # Select only the top three scale of the pyramid
feat_pyramid.append(inputs)      # Add image to the bottom of the pyramid


outputs = VGGUpsampler(feat_pyramid, scales=[1, 1e-2, 1e-4], classes=21)
outputs = Activation('softmax')(outputs)

fcn_custom = Model(inputs=inputs, outputs=outputs)

And implement a custom Fully Convolutional Network becomes simply define a series of convolutional blocks that one stacks on top of another.

Custom decoders

from keras_fcn.blocks import vgg_upsampling
from keras_fcn.decoders import Decoder
decode_blocks = [
vgg_upsampling(classes=21, target_shape=(None, 14, 14, None), scale=1),            
vgg_upsampling(classes=21, target_shape=(None, 28, 28, None),  scale=0.01),
vgg_upsampling(classes=21, target_shape=(None, 224, 224, None),  scale=0.0001)
]
outputs = Decoder(feat_pyramid[-1], decode_blocks)

The decode_blocks can be customized as well.

from keras_fcn.layers import BilinearUpSampling2D

def vgg_upsampling(classes, target_shape=None, scale=1, block_name='featx'):
    """A VGG convolutional block with bilinear upsampling for decoding.

    :param classes: Integer, number of classes
    :param scale: Float, scale factor to the input feature, varing from 0 to 1
    :param target_shape: 4D Tuples with targe_height, target_width as
    the 2nd, 3rd elements if `channels_last` or as the 3rd, 4th elements if
    `channels_first`.

    >>> from keras_fcn.blocks import vgg_upsampling
    >>> feat1, feat2, feat3 = feat_pyramid[:3]
    >>> y = vgg_upsampling(classes=21, target_shape=(None, 14, 14, None),
    >>>                    scale=1, block_name='feat1')(feat1, None)
    >>> y = vgg_upsampling(classes=21, target_shape=(None, 28, 28, None),
    >>>                    scale=1e-2, block_name='feat2')(feat2, y)
    >>> y = vgg_upsampling(classes=21, target_shape=(None, 224, 224, None),
    >>>                    scale=1e-4, block_name='feat3')(feat3, y)

    """
    def f(x, y):
        score = Conv2D(filters=classes, kernel_size=(1, 1),
                       activation='linear',
                       padding='valid',
                       kernel_initializer='he_normal',
                       name='score_{}'.format(block_name))(x)
        if y is not None:
            def scaling(xx, ss=1):
                return xx * ss
            scaled = Lambda(scaling, arguments={'ss': scale},
                            name='scale_{}'.format(block_name))(score)
            score = add([y, scaled])
        upscore = BilinearUpSampling2D(
            target_shape=target_shape,
            name='upscore_{}'.format(block_name))(score)
        return upscore
    return f

Try Examples

  1. Download VOC2011 dataset
$ wget "http://host.robots.ox.ac.uk/pascal/VOC/voc2011/VOCtrainval_25-May-2011.tar"
$ tar -xvzf VOCtrainval_25-May-2011.tar
$ mkdir ~/Datasets
$ mv TrainVal/VOCdevkit/VOC2011 ~/Datasets
  1. Mount dataset from host to container and start bash in container image

From repository keras-fcn

$ nvidia-docker run -it --rm -v `pwd`:/root/workspace -v ${Home}/Datasets/:/root/workspace/data jihong/keras-gpu bash

or equivalently,

$ make bash
  1. Within the container, run the following codes.
$ cd ~/workspace
$ pip setup.py -e .
$ cd voc2011
$ python train.py

More details see source code of the example in Training Pascal VOC2011 Segmention

Model Architecture

FCN8s with VGG16 as base net:

fcn_vgg16

TODO

  • Add ResNet
Owner
JihongJu
🤓
JihongJu
Source-to-Source Debuggable Derivatives in Pure Python

Tangent Tangent is a new, free, and open-source Python library for automatic differentiation. Existing libraries implement automatic differentiation b

Google 2.2k Jan 01, 2023
Neural Motion Learner With Python

Neural Motion Learner Introduction This work is to extract skeletal structure from volumetric observations and to learn motion dynamics from the detec

Jinseok Bae 14 Nov 28, 2022
RetinaFace: Deep Face Detection Library in TensorFlow for Python

RetinaFace is a deep learning based cutting-edge facial detector for Python coming with facial landmarks.

Sefik Ilkin Serengil 512 Dec 29, 2022
RAMA: Rapid algorithm for multicut problem

RAMA: Rapid algorithm for multicut problem Solves multicut (correlation clustering) problems orders of magnitude faster than CPU based solvers without

Paul Swoboda 60 Dec 13, 2022
Official implementation of "An Image is Worth 16x16 Words, What is a Video Worth?" (2021 paper)

An Image is Worth 16x16 Words, What is a Video Worth? paper Official PyTorch Implementation Gilad Sharir, Asaf Noy, Lihi Zelnik-Manor DAMO Academy, Al

213 Nov 12, 2022
Convert ONNX model graph to Keras model format.

Convert ONNX model graph to Keras model format.

Grigory Malivenko 175 Dec 28, 2022
A simple python module to generate anchor (aka default/prior) boxes for object detection tasks.

PyBx WIP A simple python module to generate anchor (aka default/prior) boxes for object detection tasks. Calculated anchor boxes are returned as ndarr

thatgeeman 4 Dec 15, 2022
FCN (Fully Convolutional Network) is deep fully convolutional neural network architecture for semantic pixel-wise segmentation

FCN_via_Keras FCN FCN (Fully Convolutional Network) is deep fully convolutional neural network architecture for semantic pixel-wise segmentation. This

Kento Watanabe 48 Aug 30, 2022
Demos of essentia classifiers hosted on replicate.ai

essentia-replicate-demos Demos of Essentia models hosted on replicate.ai's MTG site. The models Check our site for a complete list of the models avail

Music Technology Group - Universitat Pompeu Fabra 12 Nov 14, 2022
Step by Step on how to create an vision recognition model using LOBE.ai, export the model and run the model in an Azure Function

Step by Step on how to create an vision recognition model using LOBE.ai, export the model and run the model in an Azure Function

El Bruno 3 Mar 30, 2022
Simulation-based performance analysis of server-less Blockchain-enabled Federated Learning

Blockchain-enabled Server-less Federated Learning Repository containing the files used to reproduce the results of the publication "Blockchain-enabled

Francesc Wilhelmi 9 Sep 27, 2022
Machine learning framework for both deep learning and traditional algorithms

NeoML is an end-to-end machine learning framework that allows you to build, train, and deploy ML models. This framework is used by ABBYY engineers for

NeoML 704 Dec 27, 2022
3D ResNets for Action Recognition (CVPR 2018)

3D ResNets for Action Recognition Update (2020/4/13) We published a paper on arXiv. Hirokatsu Kataoka, Tenga Wakamiya, Kensho Hara, and Yutaka Satoh,

Kensho Hara 3.5k Jan 06, 2023
Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation

Uncertainty Estimation via Response Scaling for Pseudo-mask Noise Mitigation in Weakly-supervised Semantic Segmentation Introduction This is a PyTorch

XMed-Lab 30 Sep 23, 2022
Official implementation of ACMMM'20 paper 'Self-supervised Video Representation Learning Using Inter-intra Contrastive Framework'

Self-supervised Video Representation Learning Using Inter-intra Contrastive Framework Official code for paper, Self-supervised Video Representation Le

Li Tao 103 Dec 21, 2022
Code for the paper "Controllable Video Captioning with an Exemplar Sentence"

SMCG Code for the paper "Controllable Video Captioning with an Exemplar Sentence" Introduction We investigate a novel and challenging task, namely con

10 Dec 04, 2022
Woosung Choi 63 Nov 14, 2022
PAMI stands for PAttern MIning. It constitutes several pattern mining algorithms to discover interesting patterns in transactional/temporal/spatiotemporal databases

Introduction PAMI stands for PAttern MIning. It constitutes several pattern mining algorithms to discover interesting patterns in transactional/tempor

RAGE UDAY KIRAN 43 Jan 08, 2023
ReGAN: Sequence GAN using RE[INFORCE|LAX|BAR] based PG estimators

Sequence Generation with GANs trained by Gradient Estimation Requirements: PyTorch v0.3 Python 3.6 CUDA 9.1 (For GPU) Origin The idea is from paper Se

40 Nov 03, 2022
Course about deep learning for computer vision and graphics co-developed by YSDA and Skoltech.

Deep Vision and Graphics This repo supplements course "Deep Vision and Graphics" taught at YSDA @fall'21. The course is the successor of "Deep Learnin

Yandex School of Data Analysis 160 Jan 02, 2023