MRI reconstruction (e.g., QSM) using deep learning methods

Overview

deepMRI: Deep learning methods for MRI

Authors: Yang Gao, Hongfu Sun

  • This repo is devloped based on Pytorch (1.8 or later) and matlab (R2019a or later).

  • The codes in this repo were tested on Centos 7.8 with Nvdia Tesla V100 and macos12.0.1/win10/ubuntu19.10 with GTX 1060

     

Projects

xQSM for QSM dipole inversion

DCRnet for QSM and R2* acceleration

iQSM for single-step instant QSM

     

xQSM for QSM dipole inversion

xQSM: quantitative susceptibility mapping with octave convolutional and noise-regularized neural networks

Whole Framework

source code (github)   |   arXiv (pre-print)   |   NMR in Biomed (full paper)

     

DCRNet for QSM and R2* acceleration

Accelerating quantitative susceptibility and R2* mapping using incoherent undersampling and deep neural network reconstruction

source code (github)   |   arXiv (pre-print)   |   NeuroImage (full paper)

Whole Framework

     

iQSM for single-step instant QSM

Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enabled deep neural networks

source code (github)   |   arXiv (pre-print)

Whole Framework

top

Owner
Hongfu Sun
MRI and Deep Learning researcher
Hongfu Sun
Code for our paper "Graph Pre-training for AMR Parsing and Generation" in ACL2022

AMRBART An implementation for ACL2022 paper "Graph Pre-training for AMR Parsing and Generation". You may find our paper here (Arxiv). Requirements pyt

xfbai 60 Jan 03, 2023
VR Viewport Pose Model for Quantifying and Exploiting Frame Correlations

This repository contains the introduction to the collected VRViewportPose dataset and the code for the IEEE INFOCOM 2022 paper: "VR Viewport Pose Model for Quantifying and Exploiting Frame Correlatio

0 Aug 10, 2022
Framework that uses artificial intelligence applied to mathematical models to make predictions

LiconIA Framework that uses artificial intelligence applied to mathematical models to make predictions Interface Overview Table of contents [TOC] 1 Ar

4 Jun 20, 2021
PGPortfolio: Policy Gradient Portfolio, the source code of "A Deep Reinforcement Learning Framework for the Financial Portfolio Management Problem"(https://arxiv.org/pdf/1706.10059.pdf).

This is the original implementation of our paper, A Deep Reinforcement Learning Framework for the Financial Portfolio Management Problem (arXiv:1706.1

Zhengyao Jiang 1.5k Dec 29, 2022
Vehicle detection using machine learning and computer vision techniques for Udacity's Self-Driving Car Engineer Nanodegree.

Vehicle Detection Video demo Overview Vehicle detection using these machine learning and computer vision techniques. Linear SVM HOG(Histogram of Orien

hata 1.1k Dec 18, 2022
DatasetGAN: Efficient Labeled Data Factory with Minimal Human Effort

DatasetGAN This is the official code and data release for: DatasetGAN: Efficient Labeled Data Factory with Minimal Human Effort Yuxuan Zhang*, Huan Li

302 Jan 05, 2023
Object Tracking and Detection Using OpenCV

Object tracking is one such application of computer vision where an object is detected in a video, otherwise interpreted as a set of frames, and the object’s trajectory is estimated. For instance, yo

Happy N. Monday 4 Aug 21, 2022
Final project for machine learning (CSC 590). Detection of hepatitis C and progression through blood samples.

Hepatitis C Blood Based Detection Final project for machine learning (CSC 590). Dataset from Kaggle. Using data from previous hepatitis C blood panels

Jennefer Maldonado 1 Dec 28, 2021
《Image2Reverb: Cross-Modal Reverb Impulse Response Synthesis》(2021)

Image2Reverb Image2Reverb is an end-to-end neural network that generates plausible audio impulse responses from single images of acoustic environments

Nikhil Singh 48 Nov 27, 2022
Gesture Volume Control v.2

Gesture volume control v.2 In this project I am going to learn how to use Gesture Control to change the volume of a computer. I first look into hand t

Pavel Dat 23 Dec 26, 2022
Near-Duplicate Video Retrieval with Deep Metric Learning

Near-Duplicate Video Retrieval with Deep Metric Learning This repository contains the Tensorflow implementation of the paper Near-Duplicate Video Retr

2 Jan 24, 2022
🗣️ Microsoft Edge TTS for Home Assistant, no need for app_key

Microsoft Edge TTS for Home Assistant This component is based on the TTS service of Microsoft Edge browser, no need to apply for app_key. Install Down

152 Dec 31, 2022
Implementation of Kalman Filter in Python

Kalman Filter in Python This is a basic example of how Kalman filter works in Python. I do plan on refactoring and expanding this repo in the future.

Enoch Kan 35 Sep 11, 2022
Pytorch Implementation of Auto-Compressing Subset Pruning for Semantic Image Segmentation

Pytorch Implementation of Auto-Compressing Subset Pruning for Semantic Image Segmentation Introduction ACoSP is an online pruning algorithm that compr

Merantix 8 Dec 07, 2022
SphereFace: Deep Hypersphere Embedding for Face Recognition

SphereFace: Deep Hypersphere Embedding for Face Recognition By Weiyang Liu, Yandong Wen, Zhiding Yu, Ming Li, Bhiksha Raj and Le Song License SphereFa

Weiyang Liu 1.5k Dec 29, 2022
Personalized Federated Learning using Pytorch (pFedMe)

Personalized Federated Learning with Moreau Envelopes (NeurIPS 2020) This repository implements all experiments in the paper Personalized Federated Le

Charlie Dinh 226 Dec 30, 2022
A Weakly Supervised Amodal Segmenter with Boundary Uncertainty Estimation

Paper Khoi Nguyen, Sinisa Todorovic "A Weakly Supervised Amodal Segmenter with Boundary Uncertainty Estimation", accepted to ICCV 2021 Our code is mai

Khoi Nguyen 5 Aug 14, 2022
Hydra: an Extensible Fuzzing Framework for Finding Semantic Bugs in File Systems

Hydra: An Extensible Fuzzing Framework for Finding Semantic Bugs in File Systems Paper Finding Semantic Bugs in File Systems with an Extensible Fuzzin

gts3.org (<a href=[email protected])"> 129 Dec 15, 2022
Official Implementation of DAFormer: Improving Network Architectures and Training Strategies for Domain-Adaptive Semantic Segmentation

DAFormer: Improving Network Architectures and Training Strategies for Domain-Adaptive Semantic Segmentation [Arxiv] [Paper] As acquiring pixel-wise an

Lukas Hoyer 305 Dec 29, 2022
This repository is a basic Machine Learning train & validation Template (Using PyTorch)

pytorch_ml_template This repository is a basic Machine Learning train & validation Template (Using PyTorch) TODO Markdown 사용법 Build Docker 사용법 Anacond

1 Sep 15, 2022