Organseg dags - The repository contains the codebase for multi-organ segmentation with directed acyclic graphs (DAGs) in CT.

Overview

organseg_dags

Publication

The codebase for the paper (under review):

Zefan Yang, and Yi Wang, "Graph-based Regional Feature Enhancing for Abdominal Multi-Organ Segmentation in CT."

Usage

  • Install the required packages as follows:

    • torch==1.7.1
    • numpy==1.19.2
  • Clone the repository, devise a train.py, and evaluate the model on datasets at hand.

Code for "Finding Regions of Heterogeneity in Decision-Making via Expected Conditional Covariance" at NeurIPS 2021

Finding Regions of Heterogeneity in Decision-Making via Expected Conditional Covariance Justin Lim, Christina X Ji, Michael Oberst, Saul Blecker, Leor

Sontag Lab 3 Feb 03, 2022
SurvITE: Learning Heterogeneous Treatment Effects from Time-to-Event Data

SurvITE: Learning Heterogeneous Treatment Effects from Time-to-Event Data SurvITE: Learning Heterogeneous Treatment Effects from Time-to-Event Data Au

14 Nov 28, 2022
Code for Reciprocal Adversarial Learning for Brain Tumor Segmentation: A Solution to BraTS Challenge 2021 Segmentation Task

BRATS 2021 Solution For Segmentation Task This repo contains the supported pytorch code and configuration files to reproduce 3D medical image segmenta

Himashi Amanda Peiris 6 Sep 15, 2022
Official Keras Implementation for UNet++ in IEEE Transactions on Medical Imaging and DLMIA 2018

UNet++: A Nested U-Net Architecture for Medical Image Segmentation UNet++ is a new general purpose image segmentation architecture for more accurate i

Zongwei Zhou 1.8k Dec 27, 2022
Adaptive Pyramid Context Network for Semantic Segmentation (APCNet CVPR'2019)

Adaptive Pyramid Context Network for Semantic Segmentation (APCNet CVPR'2019) Introduction Official implementation of Adaptive Pyramid Context Network

21 Nov 09, 2022
Lightweight Salient Object Detection in Optical Remote Sensing Images via Feature Correlation

CorrNet This project provides the code and results for 'Lightweight Salient Object Detection in Optical Remote Sensing Images via Feature Correlation'

Gongyang Li 13 Nov 03, 2022
Digan - Official PyTorch implementation of Generating Videos with Dynamics-aware Implicit Generative Adversarial Networks

DIGAN (ICLR 2022) Official PyTorch implementation of "Generating Videos with Dyn

Sihyun Yu 147 Dec 31, 2022
Official code repository for ICCV 2021 paper: Gravity-Aware Monocular 3D Human Object Reconstruction

GraviCap Official code repository for ICCV 2021 paper: Gravity-Aware Monocular 3D Human Object Reconstruction. Gravity-Aware Monocular 3D Human-Object

Rishabh Dabral 15 Dec 09, 2022
Code accompanying the paper "How Tight Can PAC-Bayes be in the Small Data Regime?"

How Tight Can PAC-Bayes be in the Small Data Regime? This is the code to reproduce all experiments for the following paper: @inproceedings{Foong:2021:

5 Dec 21, 2021
Labels4Free: Unsupervised Segmentation using StyleGAN

Labels4Free: Unsupervised Segmentation using StyleGAN ICCV 2021 Figure: Some segmentation masks predicted by Labels4Free Framework on real and synthet

70 Dec 23, 2022
Deep Markov Factor Analysis (NeurIPS2021)

Deep Markov Factor Analysis (DMFA) Codes and experiments for deep Markov factor analysis (DMFA) model accepted for publication at NeurIPS2021: A. Farn

Sarah Ostadabbas 2 Dec 16, 2022
This repository contains the source code and data for reproducing results of Deep Continuous Clustering paper

Deep Continuous Clustering Introduction This is a Pytorch implementation of the DCC algorithms presented in the following paper (paper): Sohil Atul Sh

Sohil Shah 197 Nov 29, 2022
This repository is based on Ultralytics/yolov5, with adjustments to enable polygon prediction boxes.

Polygon-Yolov5 This repository is based on Ultralytics/yolov5, with adjustments to enable polygon prediction boxes. Section I. Description The codes a

xinzelee 226 Jan 05, 2023
2D Human Pose estimation using transformers. Implementation in Pytorch

PE-former: Pose Estimation Transformer Vision transformer architectures perform very well for image classification tasks. Efforts to solve more challe

Panteleris Paschalis 23 Oct 17, 2022
Betafold - AlphaFold with tunings

BetaFold We (hegelab.org) craeted this standalone AlphaFold (AlphaFold-Multimer,

2 Aug 11, 2022
[NeurIPS 2021] SSUL: Semantic Segmentation with Unknown Label for Exemplar-based Class-Incremental Learning

SSUL - Official Pytorch Implementation (NeurIPS 2021) SSUL: Semantic Segmentation with Unknown Label for Exemplar-based Class-Incremental Learning Sun

Clova AI Research 44 Dec 27, 2022
Cancer-and-Tumor-Detection-Using-Inception-model - In this repo i am gonna show you how i did cancer/tumor detection in lungs using deep neural networks, specifically here the Inception model by google.

Cancer-and-Tumor-Detection-Using-Inception-model In this repo i am gonna show you how i did cancer/tumor detection in lungs using deep neural networks

Deepak Nandwani 1 Jan 01, 2022
A Neural Net Training Interface on TensorFlow, with focus on speed + flexibility

Tensorpack is a neural network training interface based on TensorFlow. Features: It's Yet Another TF high-level API, with speed, and flexibility built

Tensorpack 6.2k Jan 09, 2023
Code release for ConvNeXt model

A ConvNet for the 2020s Official PyTorch implementation of ConvNeXt, from the following paper: A ConvNet for the 2020s. arXiv 2022. Zhuang Liu, Hanzi

Meta Research 4.6k Jan 08, 2023