5 Repositories
Latest Python Libraries
QSIprep: Preprocessing and analysis of q-space images
QSIprep: Preprocessing and analysis of q-space images Full documentation at https://qsiprep.readthedocs.io About qsiprep configures pipelines for proc
Find graph motifs using intuitive notation
d o t m o t i f Find graph motifs using intuitive notation DotMotif is a library that identifies subgraphs or motifs in a large graph. It looks like t
Scalable Optical Flow-based Image Montaging and Alignment
SOFIMA SOFIMA (Scalable Optical Flow-based Image Montaging and Alignment) is a tool for stitching, aligning and warping large 2d, 3d and 4d microscopy
Kimimaro: Skeletonize Densely Labeled Images
Kimimaro: Skeletonize Densely Labeled Images # Produce SWC files from volumetric images. kimimaro forge labels.npy --progress # writes to ./kimimaro_o
PyTorch Connectomics: segmentation toolbox for EM connectomics
Introduction The field of connectomics aims to reconstruct the wiring diagram of the brain by mapping the neural connections at the level of individua