8 Repositories
Latest Python Libraries
Easy genetic ancestry predictions in Python
ezancestry Easily visualize your direct-to-consumer genetics next to 2500+ samples from the 1000 genomes project. Evaluate the performance of a custom
Data intensive science for everyone.
InVesalius InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesaliu
Grammar of Scalable Linked Interactive Nucleotide Graphics
Gosling.js Gosling.js is a declarative grammar for interactive (epi)genomics visualization on the Web. ⚠️ Please be aware that the grammar of Gosling.
Simple web browser to visualize HiC tracks
HiCBrowser : A simple web browser to visualize Hi-C and other genomic tracks Fidel Ramirez, José Villaveces, Vivek Bhardwaj Installation You can insta
Michael Vinyard's utilities
Install vintools To download this package from pypi: pip install vintools Install the development package To download and install the developmen
Toolchest provides APIs for scientific and bioinformatic data analysis.
Toolchest Python Client Toolchest provides APIs for scientific and bioinformatic data analysis. It allows you to abstract away the costliness of runni
Simulate genealogical trees and genomic sequence data using population genetic models
msprime msprime is a population genetics simulator based on tskit. Msprime can simulate random ancestral histories for a sample of individuals (consis
Full Spectrum Bioinformatics - a free online text designed to introduce key topics in Bioinformatics using the Python
Full Spectrum Bioinformatics is a free online text designed to introduce key topics in Bioinformatics using the Python programming language. The text is written in interactive Jupyter Notebooks, whic