17 Repositories
Latest Python Libraries
Python package for analyzing behavioral data for Brain Observatory: Visual Behavior
Allen Institute Visual Behavior Analysis package This repository contains code for analyzing behavioral data from the Allen Brain Observatory: Visual
PyoMyo - Python Opensource Myo library
PyoMyo Python module for the Thalmic Labs Myo armband. Cross platform and multithreaded and works without the Myo SDK. pip install pyomyo Documentati
A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
Imaging Transcriptomics Imaging transcriptomics is a methodology that allows to identify patterns of correlation between gene expression and some prop
Clinica is a software platform for clinical research studies involving patients with neurological and psychiatric diseases and the acquisition of multimodal data
Clinica Software platform for clinical neuroimaging studies Homepage | Documentation | Paper | Forum | See also: AD-ML, AD-DL ClinicaDL About The Proj
Deep and online learning with spiking neural networks in Python
Introduction The brain is the perfect place to look for inspiration to develop more efficient neural networks. One of the main differences with modern
coldcuts is an R package to automatically generate and plot segmentation drawings in R
coldcuts coldcuts is an R package that allows you to draw and plot automatically segmentations from 3D voxel arrays. The name is inspired by one of It
Repository of continual learning papers
Continual learning paper repository This repository contains an incomplete (but dynamically updated) list of papers exploring continual learning in ma
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
MNE-Python MNE-Python software is an open-source Python package for exploring, visualizing, and analyzing human neurophysiological data such as MEG, E
Inner ear models for Python
cochlea cochlea is a collection of inner ear models. All models are easily accessible as Python functions. They take sound signal as input and return
Toolbox to analyze temporal context invariance of deep neural networks
PyTCI A toolbox that estimates the integration window of a sensory response using the "Temporal Context Invariance" paradigm (TCI). The TCI method Int
PsychoPy is an open-source package for creating experiments in behavioral science.
PsychoPy is an open-source package for creating experiments in behavioral science. It aims to provide a single package that is: precise enoug
pulse2percept: A Python-based simulation framework for bionic vision
pulse2percept: A Python-based simulation framework for bionic vision Retinal degenerative diseases such as retinitis pigmentosa and macular degenerati
Python package for covariance matrices manipulation and Biosignal classification with application in Brain Computer interface
pyRiemann pyRiemann is a python package for covariance matrices manipulation and classification through Riemannian geometry. The primary target is cla
AntroPy: entropy and complexity of (EEG) time-series in Python
AntroPy is a Python 3 package providing several time-efficient algorithms for computing the complexity of time-series. It can be used for example to e
Autolfads-tf2 - A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS
autolfads-tf2 A TensorFlow 2.0 implementation of LFADS and AutoLFADS. Installati
Distributed behavioral experiments
Autopilot Docs Paper Forum Hardware Autopilot is a Python framework for performing complex, hardware-intensive behavioral experiments with swarms of n
PyTorch Connectomics: segmentation toolbox for EM connectomics
Introduction The field of connectomics aims to reconstruct the wiring diagram of the brain by mapping the neural connections at the level of individua